CDS

Accession Number TCMCG017C04694
gbkey CDS
Protein Id OMP08697.1
Location complement(join(15973..16709,16934..17536,18042..18195,18274..18481,18709..18927,19084..19343,19743..20138,21078..21227,21792..21980,22398..22462,22688..22844,23541..23783))
GeneID InterPro:IPR000330
Organism Corchorus olitorius
locus_tag COLO4_06204

Protein

Length 1126aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012648.1
Definition SNF2-related protein [Corchorus olitorius]
Locus_tag COLO4_06204

EGGNOG-MAPPER Annotation

COG_category BK
Description ATP-dependent DNA helicase CHR12
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11647        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04714        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
GOs GO:0000182        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0001085        [VIEW IN EMBL-EBI]
GO:0001102        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005984        [VIEW IN EMBL-EBI]
GO:0005985        [VIEW IN EMBL-EBI]
GO:0005987        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009311        [VIEW IN EMBL-EBI]
GO:0009313        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010453        [VIEW IN EMBL-EBI]
GO:0010455        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010570        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010810        [VIEW IN EMBL-EBI]
GO:0010811        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016514        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030155        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031490        [VIEW IN EMBL-EBI]
GO:0031491        [VIEW IN EMBL-EBI]
GO:0031492        [VIEW IN EMBL-EBI]
GO:0031494        [VIEW IN EMBL-EBI]
GO:0031496        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033613        [VIEW IN EMBL-EBI]
GO:0034198        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0036003        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0042148        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042766        [VIEW IN EMBL-EBI]
GO:0043044        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043618        [VIEW IN EMBL-EBI]
GO:0043620        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0043902        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044107        [VIEW IN EMBL-EBI]
GO:0044109        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044275        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044282        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0045785        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045927        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046164        [VIEW IN EMBL-EBI]
GO:0046352        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061412        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070577        [VIEW IN EMBL-EBI]
GO:0070603        [VIEW IN EMBL-EBI]
GO:0070784        [VIEW IN EMBL-EBI]
GO:0070786        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090033        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:0140033        [VIEW IN EMBL-EBI]
GO:1900187        [VIEW IN EMBL-EBI]
GO:1900189        [VIEW IN EMBL-EBI]
GO:1900190        [VIEW IN EMBL-EBI]
GO:1900192        [VIEW IN EMBL-EBI]
GO:1900428        [VIEW IN EMBL-EBI]
GO:1900430        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901616        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1904949        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:1990928        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000217        [VIEW IN EMBL-EBI]
GO:2000219        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGGCTCAGCTAGAGCACCAACAACAGAAGGAGGAACCTTGTTTAGACAATTTACAGAAGGCAAAGTCTTTGATCTGTGCCCTTAACTTTGTCTCTAGAAACCTCCCTCTGCCTCCTGACTTATTCGACGTCGTTTCCTCTATATGCCATGACGAACAAGAGGGTCTTGGTGAGGCCACCGATGACGGGACCCCGGGTGAGGATGGATCTGATGGGGCTGGAGTCTCCCAGATTGTTTCGGATGATTCTACTAATTCTGAGAAGGATGATTTATTGGGTGACCTTGATGATGCATTATCAAGACAACGCTCAAAATTCATGTCTGGTTTTGGTTTGGCAGAATCCAAGGAAAACCGTTATCAGAGCCACCTTCATCATCGGTTGAATGAACTTGAAGAGTTGCCACCTAGCAGAGGGAAGGACCTGCAGGCAAAGTGCTTACTTGAACTCTATGGAATAAAGCTAGCAGAGTTGCAAAGCAAGATACGTTCTCAAGTGAGTTCTGAGTATTGGCTTCAGTTGAACTGTGCATATCCTGACAAACAGTTGTTTGACTGGGGAATGGCGCGATTGCCTTTTACATCGTATGGAATTTTTGTTCCATTCACTACAGAAGCTGATGATCAAGCAAGAAAGAAACGGGATTATGAGAGGTTATCACGATTGAGAGAGGAGGAAAAAAACCATTTGGAAAATAGGAAGAAGAAATTCTTTTCAGAAATAGTCAATGCCTTCCGTGACTTCCAGTTGCAAATTCAAGCTACTCTAAAGCGTCGAAAACAAAGGAATGATGGTGTCCAGGCATGGCACGGAAGGCAAAGACAACGTGCTACAAGAGCAGAGAAATTGAGGTTCCAGGCCCTGAAGGCTGATGATCAAGAAGCATATATGAGATTAGTGAAGGAGAGCAAGAATGAACGGTTAACTATGCTTCTTTCTGAAACAAATAAGCTCCTTGTTAATTTGGGAGCTGCAGTTCAACGGCAGAAAGATGCTAAGAATTCAGATGGCCTTGAAGATTTGAAAGATTTAGATTCTGATTCACCGGAGATAGATGCTTTGAAGGATGGAACTCCTCAAGATTCACCACCGGAGGAAGAAATAGAAACCACTGATTCTGATCAGAATGATGACTCCAGTGATCTACTTGAAGGTCAGCGGCAGTATAATTCAGCTATTCATGCGATTCAGGAGAAGGTAACTGAGCAGCCATCCTTGCTTCAAGGTGGAGAATTAAGACCATACCAGTTAGAAGGGCTTCAATGGATGCTCTCTTTGTTTAATAACAACCTTAATGGAATTTTAGCTGATGAGATGGGGTTAGGAAAAACAATACAGACTATATCATTAATTGCTTATCTCTTGGAAAACAAAGGTGTAACTGGGCCTCACTTGATAGTGGCGCCAAAAGCTGTACTGCCTAATTGGATTAATGAATTCTCAACATGGGCTCCTAGCATTCATGCAGTTCTTTACGATGGACGTTTAGATGAGAGGAAGGCATTGAGGGAAGAAATATCCAGAGATGCAAATTTTAGCGTGTTGATTACACACTATGATCTTATTATGAGAGATAAAGCATTCTTGAAGAAGATACACTGGTTCTACATGATTGTTGATGAAGGGCATCGGTTAAAGAACCATGACTGTGCTCTTGCGCGAACTCTCCTCTCAGGCTATCAGATCCAGCGAAGACTTCTGTTAACTGGGACTCCGATACAAAATAGTTTACAAGAATTGTGGTCACTCCTTAATTTTCTGCTCCCAAACATTTTCAATTCCGTTCAGAATTTTGAGGAGTGGTTTAATGCCCCCTTCGCAGATCGTGGTGATGTTTCTCTTACAGACGAAGAAGAACTCTTGATTATTCGCCGTCTGCATCATGTTATAAGGCCATTCATCTTAAGGAGGAAAAAAGATGAGGTGGAGAAATACCTTCCTGGAAAATCACAGGTTATACTCAAATGTGATCTGTCAGCATGGCAGAAAGCATACTATCAGCAAGTAACAGAGAAGGGCAGGGTCGGGCTAGATAATGGGTCTGGAAAATCAAAGAGCCTCCAAAATCTGACAATGCAATTGAGGAAGTGTTGTAATCACCCTTACCTCTTTGTGCCTCACTACAATATGTGGCAGAGAGAGGAGATTGTAAGAGCATCTGGGAAATTTGAGCTCCTTGATCGATTACTCCCAAAACTTCATAGAACTGGCCATCGAGTCCTGCTTTTCTCCCAAATGACTCATCTAATGGACATTCTTGAGATATATCTGAGACTCAATGATTTCATGTATCTTAGACTTGACGGCTCTACAAAAACTGAGGAAAGAGGGACTTTGCTGAAGAAGTTCAATGCTCCAGACTCTCCTTATTTTATGTTTCTACTAAGCACTCGTGCTGGTGGTCTTGGCCTGAATTTGCAGACAGCTGATACTGTAATCATTTTTGATAGTGACTGGAATCCACAAATGGACCAACAGGCAGAGGATCGAGCCCATCGTATTGGACAAAAGAAAGAAGTCAGGGTTTTTGTGCTGGTTAGTGTTGGATCAATTGAAGAGGTCATTTTAGAACGTGCAAAGCAGAAAATGGGTATTGATGCCAAGGTCATCCAGGCCGGATTATTTAATACGACTTCCACAGCTCAGGACAGAAAAGAAATGCTGGAAGAAATTATGCGTAGAGGAACAAGAGCACTTGGAACAGATGTGCCAAGTGAGAGAGAAATCAACAGACTTGCAGCTCGTTCAGATGAGGAGTTCCGGATGTTTGAGCAAATGGATGAGGCAAGAAGATTAAAGGAGAATTATAGGTCTCGTCTCATGGAAGAACACGAGGTACCTGAGTGGGTATATGAAATTAATAATGATGAAGCGAAGGCCAAAAGTTTAGAAAATAACAATGCTGAATTAGGGAAGCGAAAAAGGAAGGGGGGAAACTATTATGCGGATACATTAAGCGACTTACAGTTTATGAGGGCTGTGGAAAATGCAGAAGACATGGCAAAAAAGGTATCAAGTAAACGGAAAAGAAAAGACCATCTTCCTTCTGAAGTTAATGAATCTGTTAGTAATAACATAGAGGAAGAGAAAAAAGTATCAGAATTTAGGAATGAGAATGTGCCGGTAATAAGCGAGGGAACAAGTGAAGATACCTATGGTTCAGCTCCAAAGAGACTGAAGTCCAATGGTGAAATCACCGAGGAACTCAAGTATCCTGGTGTGGAGAAATCTGAACATCAGGGTGTTGGAGGAGGTTCTTGGAATGATCGAATAATTACATGGAATACTCATAAGAAGAAGAGATCAAGCTATGTTTTTCCAAGTTCATCATCAGATTCTAGACAGAATTCCAGTGGAAGAGGAAATGGATGGGCTTGA
Protein:  
MVAQLEHQQQKEEPCLDNLQKAKSLICALNFVSRNLPLPPDLFDVVSSICHDEQEGLGEATDDGTPGEDGSDGAGVSQIVSDDSTNSEKDDLLGDLDDALSRQRSKFMSGFGLAESKENRYQSHLHHRLNELEELPPSRGKDLQAKCLLELYGIKLAELQSKIRSQVSSEYWLQLNCAYPDKQLFDWGMARLPFTSYGIFVPFTTEADDQARKKRDYERLSRLREEEKNHLENRKKKFFSEIVNAFRDFQLQIQATLKRRKQRNDGVQAWHGRQRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTMLLSETNKLLVNLGAAVQRQKDAKNSDGLEDLKDLDSDSPEIDALKDGTPQDSPPEEEIETTDSDQNDDSSDLLEGQRQYNSAIHAIQEKVTEQPSLLQGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVTGPHLIVAPKAVLPNWINEFSTWAPSIHAVLYDGRLDERKALREEISRDANFSVLITHYDLIMRDKAFLKKIHWFYMIVDEGHRLKNHDCALARTLLSGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEEWFNAPFADRGDVSLTDEEELLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDLSAWQKAYYQQVTEKGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVPHYNMWQREEIVRASGKFELLDRLLPKLHRTGHRVLLFSQMTHLMDILEIYLRLNDFMYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRKEMLEEIMRRGTRALGTDVPSEREINRLAARSDEEFRMFEQMDEARRLKENYRSRLMEEHEVPEWVYEINNDEAKAKSLENNNAELGKRKRKGGNYYADTLSDLQFMRAVENAEDMAKKVSSKRKRKDHLPSEVNESVSNNIEEEKKVSEFRNENVPVISEGTSEDTYGSAPKRLKSNGEITEELKYPGVEKSEHQGVGGGSWNDRIITWNTHKKKRSSYVFPSSSSDSRQNSSGRGNGWA